Package: netassoc
Type: Package
Title: Inference of Species Associations from Co-Occurrence Data
Version: 0.7.1
Date: 2025-07-21
Maintainer: Benjamin Blonder <benjamin.blonder@berkeley.edu>
Description: Infers species associations from community matrices. Uses
        local and (optional) regional-scale co-occurrence data by
        comparing observed partial correlation coefficients between
        species to those estimated from regional species distributions.
        Extends Gaussian graphical models to a null modeling framework.
        Provides interface to a variety of inverse covariance matrix
        estimation methods.
License: GPL-3
Depends: igraph, infotheo
Imports: corpcor, huge, vegan
Authors@R: c(person(given = "Benjamin",
                        family = "Blonder",
                        role = c("aut", "cre"),
                        email = "benjamin.blonder@berkeley.edu"),
                 person(given = "Naia",
                        family = "Morueta-Holme",
                        role = "aut"))
Config/pak/sysreqs: libglpk-dev libxml2-dev
Repository: https://bblonder.r-universe.dev
Date/Publication: 2025-07-21 17:05:43 UTC
RemoteUrl: https://github.com/bblonder/netassoc
RemoteRef: HEAD
RemoteSha: 1aca4b15d0a7ac30146b05a6fbf0425432a03e78
NeedsCompilation: no
Packaged: 2026-06-22 10:00:26 UTC; root
Author: Benjamin Blonder [aut, cre],
  Naia Morueta-Holme [aut]